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  5. Gb_04381

Gb_04381


Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 512.0)


Gene families : OG0011413 (Archaeplastida) Phylogenetic Tree(s): OG0011413_tree ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0002335 (SeedPlants) Phylogenetic Tree(s): OG_06_0002335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04381
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
Gb_07756 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.1 Archaeplastida
MA_297123g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 253 283
IPR002885 Pentatricopeptide_repeat 225 252
IPR002885 Pentatricopeptide_repeat 620 644
IPR002885 Pentatricopeptide_repeat 284 313
IPR002885 Pentatricopeptide_repeat 149 197
IPR002885 Pentatricopeptide_repeat 545 594
IPR002885 Pentatricopeptide_repeat 344 391
IPR002885 Pentatricopeptide_repeat 445 492
No external refs found!