1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_04514

Gb_04514


Description : 3-hydroxyacyl-CoA dehydratase (HCD)


Gene families : OG0003667 (Archaeplastida) Phylogenetic Tree(s): OG0003667_tree ,
OG_05_0003859 (LandPlants) Phylogenetic Tree(s): OG_05_0003859_tree ,
OG_06_0003683 (SeedPlants) Phylogenetic Tree(s): OG_06_0003683_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04514
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT5G10480 PEP, PAS2 Protein-tyrosine phosphatase-like, PTPLA 0.08 Archaeplastida
Cpa|evm.model.tig00020909.12 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 Archaeplastida
GSVIVT01005931001 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 Archaeplastida
MA_125121g0010 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.07 Archaeplastida
MA_57869g0010 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.09 Archaeplastida
Pp3c2_13410V3.1 No alias Protein-tyrosine phosphatase-like, PTPLA 0.02 Archaeplastida
Solyc04g014370.4.1 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.06 Archaeplastida
Zm00001e016910_P001 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.03 Archaeplastida
Zm00001e025807_P001 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007482 Tyr_Pase-like_PTPLA 55 216
No external refs found!