Gb_04583

Description : Alfin-like transcription factor

Gene families : OG0000328 (Archaeplastida) Phylogenetic Tree(s): OG0000328_tree ,
OG_05_0059114 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0052231 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_04583
Cluster	HCCA: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method
AT5G26210	AL4	alfin-like 4	0.04	Archaeplastida
Cpa\|evm.model.tig00021357.26	No alias	No description available	0.02	Archaeplastida
LOC_Os04g36730.1	No alias	Alfin-like transcription factor	0.05	Archaeplastida
LOC_Os07g41740.1	No alias	Alfin-like transcription factor	0.05	Archaeplastida
MA_10431196g0010	No alias	Alfin-like transcription factor	0.02	Archaeplastida
Pp3c2_31290V3.1	No alias	alfin-like 3	0.01	Archaeplastida
Pp3c5_5030V3.1	No alias	alfin-like 3	0.03	Archaeplastida
Pp3c7_26020V3.1	No alias	alfin-like 3	0.02	Archaeplastida
Solyc12g096040.3.1	No alias	Alfin-like transcription factor	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042393	histone binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
CC	GO:0032991	protein-containing complex	IEP	Neighborhood
CC	GO:0032993	protein-DNA complex	IEP	Neighborhood
CC	GO:0035145	exon-exon junction complex	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
CC	GO:0044428	nuclear part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
CC	GO:0044815	DNA packaging complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR021998	Alfin	254	328
IPR021998	Alfin	130	164

External Links

No external refs found!

Gb_04583

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation