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Gb_04682


Description : Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana (sp|q8w4p9|tt9_arath : 602.0)


Gene families : OG0003614 (Archaeplastida) Phylogenetic Tree(s): OG0003614_tree ,
OG_05_0003790 (LandPlants) Phylogenetic Tree(s): OG_05_0003790_tree ,
OG_06_0004176 (SeedPlants) Phylogenetic Tree(s): OG_06_0004176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04682
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cre12.g515250 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01029303001 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.04 Archaeplastida
MA_41930g0010 No alias Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c5_16960V3.1 No alias No annotation 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019155 CLEC16A/TT9_N 43 193
No external refs found!