Gb_04698


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0027088 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04698
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.03 Archaeplastida
AT3G01220 ATHB20, HB20 homeobox protein 20 0.03 Archaeplastida
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.03 Archaeplastida
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.03 Archaeplastida
AT5G53980 ATHB52, HB52 homeobox protein 52 0.05 Archaeplastida
GSVIVT01019012001 No alias RNA biosynthesis.transcriptional activation.HB... 0.07 Archaeplastida
GSVIVT01020033001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
LOC_Os03g07450.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os03g10210.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os07g39320.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os09g21180.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os09g35910.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os10g23090.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_10428916g0010 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
MA_12866g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_130615g0020 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Pp3c12_21760V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c14_21680V3.1 No alias homeobox 3 0.03 Archaeplastida
Pp3c17_18190V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c1_36940V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c1_37070V3.1 No alias homeobox protein 16 0.04 Archaeplastida
Pp3c5_27150V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.03 Archaeplastida
Smo19476 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Solyc01g010600.4.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Solyc02g067410.2.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Solyc02g087840.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc04g074700.4.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc06g053220.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e010218_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e023458_P003 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 144 176
IPR001356 Homeobox_dom 87 140
No external refs found!