Description : transcription factor (HD-ZIP I/II)
Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0027088 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_04698 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00006p00267430 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
AT2G46680 | HB-7, ATHB-7, ATHB7 | homeobox 7 | 0.03 | Archaeplastida | |
AT3G01220 | ATHB20, HB20 | homeobox protein 20 | 0.03 | Archaeplastida | |
AT3G01470 | ATHB1, ATHB-1,... | homeobox 1 | 0.03 | Archaeplastida | |
AT3G61890 | HB-12, ATHB-12, ATHB12 | homeobox 12 | 0.03 | Archaeplastida | |
AT5G53980 | ATHB52, HB52 | homeobox protein 52 | 0.05 | Archaeplastida | |
GSVIVT01019012001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.07 | Archaeplastida | |
GSVIVT01020033001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | Archaeplastida | |
LOC_Os03g07450.1 | No alias | transcription factor (HD-ZIP I/II) | 0.04 | Archaeplastida | |
LOC_Os03g10210.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
LOC_Os07g39320.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
LOC_Os08g32080.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
LOC_Os08g32085.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
LOC_Os09g21180.1 | No alias | transcription factor (HD-ZIP I/II) | 0.04 | Archaeplastida | |
LOC_Os09g35910.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
LOC_Os10g23090.1 | No alias | transcription factor (HD-ZIP I/II) | 0.02 | Archaeplastida | |
LOC_Os10g26500.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
MA_10428916g0010 | No alias | transcription factor (HD-ZIP I/II) | 0.04 | Archaeplastida | |
MA_12866g0010 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
MA_130615g0020 | No alias | transcription factor (HD-ZIP I/II) | 0.05 | Archaeplastida | |
Pp3c12_21760V3.1 | No alias | homeobox protein 16 | 0.03 | Archaeplastida | |
Pp3c14_21680V3.1 | No alias | homeobox 3 | 0.03 | Archaeplastida | |
Pp3c17_18190V3.1 | No alias | homeobox protein 16 | 0.03 | Archaeplastida | |
Pp3c1_36940V3.1 | No alias | homeobox protein 16 | 0.03 | Archaeplastida | |
Pp3c1_37070V3.1 | No alias | homeobox protein 16 | 0.04 | Archaeplastida | |
Pp3c5_27150V3.1 | No alias | homeobox protein 16 | 0.02 | Archaeplastida | |
Pp3c7_2100V3.1 | No alias | Homeobox-leucine zipper protein family | 0.03 | Archaeplastida | |
Smo19476 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
Solyc01g010600.4.1 | No alias | transcription factor (HD-ZIP I/II) | 0.05 | Archaeplastida | |
Solyc02g067410.2.1 | No alias | transcription factor (HD-ZIP I/II) | 0.02 | Archaeplastida | |
Solyc02g087840.3.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
Solyc04g074700.4.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
Solyc06g053220.3.1 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
Zm00001e010218_P001 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida | |
Zm00001e023458_P003 | No alias | transcription factor (HD-ZIP I/II) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Neighborhood |
MF | GO:0004601 | peroxidase activity | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
BP | GO:0008152 | metabolic process | IEP | Neighborhood |
MF | GO:0016209 | antioxidant activity | IEP | Neighborhood |
MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Neighborhood |
MF | GO:0019842 | vitamin binding | IEP | Neighborhood |
MF | GO:0020037 | heme binding | IEP | Neighborhood |
BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
CC | GO:0032993 | protein-DNA complex | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
CC | GO:0044815 | DNA packaging complex | IEP | Neighborhood |
MF | GO:0046906 | tetrapyrrole binding | IEP | Neighborhood |
MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
BP | GO:0065003 | protein-containing complex assembly | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
No external refs found! |