AT2G19830 (SNF7.2, VPS32)

Aliases : SNF7.2, VPS32

Description : SNF7 family protein

Gene families : OG0001223 (Archaeplastida) Phylogenetic Tree(s): OG0001223_tree ,
OG_05_0001557 (LandPlants) Phylogenetic Tree(s): OG_05_0001557_tree ,
OG_06_0001828 (SeedPlants) Phylogenetic Tree(s): OG_06_0001828_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G19830
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01016913001	No alias	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.03	Archaeplastida
LOC_Os09g09480.2	No alias	component VPS32/SNF7 of ESCRT-III complex	0.04	Archaeplastida
Mp6g10770.1	No alias	component VPS32/SNF7 of ESCRT-III complex	0.03	Archaeplastida
Zm00001e024016_P002	No alias	component VPS32/SNF7 of ESCRT-III complex	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0000815	ESCRT III complex	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016192	vesicle-mediated transport	ISS	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044440	endosomal part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000060	protein import into nucleus, translocation	IEP	Neighborhood
MF	GO:0000149	SNARE binding	IEP	Neighborhood
CC	GO:0000164	protein phosphatase type 1 complex	IEP	Neighborhood
CC	GO:0000325	plant-type vacuole	IEP	Neighborhood
MF	GO:0004602	glutathione peroxidase activity	IEP	Neighborhood
MF	GO:0004860	protein kinase inhibitor activity	IEP	Neighborhood
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005665	RNA polymerase II, core complex	IEP	Neighborhood
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
CC	GO:0005794	Golgi apparatus	IEP	Neighborhood
CC	GO:0005798	Golgi-associated vesicle	IEP	Neighborhood
CC	GO:0005801	cis-Golgi network	IEP	Neighborhood
BP	GO:0006301	postreplication repair	IEP	Neighborhood
BP	GO:0006623	protein targeting to vacuole	IEP	Neighborhood
BP	GO:0006886	intracellular protein transport	IEP	Neighborhood
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Neighborhood
BP	GO:0006896	Golgi to vacuole transport	IEP	Neighborhood
BP	GO:0007021	tubulin complex assembly	IEP	Neighborhood
BP	GO:0007034	vacuolar transport	IEP	Neighborhood
BP	GO:0007049	cell cycle	IEP	Neighborhood
BP	GO:0007163	establishment or maintenance of cell polarity	IEP	Neighborhood
BP	GO:0007292	female gamete generation	IEP	Neighborhood
BP	GO:0008104	protein localization	IEP	Neighborhood
BP	GO:0008154	actin polymerization or depolymerization	IEP	Neighborhood
BP	GO:0008284	positive regulation of cell proliferation	IEP	Neighborhood
MF	GO:0008320	protein transmembrane transporter activity	IEP	Neighborhood
CC	GO:0008540	proteasome regulatory particle, base subcomplex	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
BP	GO:0009404	toxin metabolic process	IEP	Neighborhood
BP	GO:0009407	toxin catabolic process	IEP	Neighborhood
BP	GO:0009554	megasporogenesis	IEP	Neighborhood
BP	GO:0009800	cinnamic acid biosynthetic process	IEP	Neighborhood
BP	GO:0009803	cinnamic acid metabolic process	IEP	Neighborhood
BP	GO:0009853	photorespiration	IEP	Neighborhood
BP	GO:0009903	chloroplast avoidance movement	IEP	Neighborhood
BP	GO:0009904	chloroplast accumulation movement	IEP	Neighborhood
BP	GO:0010038	response to metal ion	IEP	Neighborhood
BP	GO:0010078	maintenance of root meristem identity	IEP	Neighborhood
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	Neighborhood
BP	GO:0010921	regulation of phosphatase activity	IEP	Neighborhood
BP	GO:0010923	negative regulation of phosphatase activity	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0015988	energy coupled proton transmembrane transport, against electrochemical gradient	IEP	Neighborhood
BP	GO:0015991	ATP hydrolysis coupled proton transport	IEP	Neighborhood
MF	GO:0019210	kinase inhibitor activity	IEP	Neighborhood
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030041	actin filament polymerization	IEP	Neighborhood
CC	GO:0030133	transport vesicle	IEP	Neighborhood
CC	GO:0030134	COPII-coated ER to Golgi transport vesicle	IEP	Neighborhood
CC	GO:0030135	coated vesicle	IEP	Neighborhood
CC	GO:0030136	clathrin-coated vesicle	IEP	Neighborhood
CC	GO:0030140	trans-Golgi network transport vesicle	IEP	Neighborhood
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	Neighborhood
CC	GO:0030964	NADH dehydrogenase complex	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031209	SCAR complex	IEP	Neighborhood
CC	GO:0031371	ubiquitin conjugating enzyme complex	IEP	Neighborhood
CC	GO:0031372	UBC13-MMS2 complex	IEP	Neighborhood
BP	GO:0031400	negative regulation of protein modification process	IEP	Neighborhood
BP	GO:0032269	negative regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0032515	negative regulation of phosphoprotein phosphatase activity	IEP	Neighborhood
CC	GO:0032588	trans-Golgi network membrane	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0035266	meristem growth	IEP	Neighborhood
BP	GO:0035305	negative regulation of dephosphorylation	IEP	Neighborhood
BP	GO:0035308	negative regulation of protein dephosphorylation	IEP	Neighborhood
BP	GO:0042023	DNA endoreduplication	IEP	Neighborhood
BP	GO:0042127	regulation of cell proliferation	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
MF	GO:0042887	amide transmembrane transporter activity	IEP	Neighborhood
BP	GO:0043086	negative regulation of catalytic activity	IEP	Neighborhood
BP	GO:0043094	cellular metabolic compound salvage	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Neighborhood
BP	GO:0044092	negative regulation of molecular function	IEP	Neighborhood
CC	GO:0044431	Golgi apparatus part	IEP	Neighborhood
BP	GO:0044786	cell cycle DNA replication	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood
CC	GO:0045271	respiratory chain complex I	IEP	Neighborhood
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	Neighborhood
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	Neighborhood
BP	GO:0046686	response to cadmium ion	IEP	Neighborhood
BP	GO:0046907	intracellular transport	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0048232	male gamete generation	IEP	Neighborhood
BP	GO:0048829	root cap development	IEP	Neighborhood
MF	GO:0051219	phosphoprotein binding	IEP	Neighborhood
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051649	establishment of localization in cell	IEP	Neighborhood
BP	GO:0060968	regulation of gene silencing	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood
CC	GO:0071944	cell periphery	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072665	protein localization to vacuole	IEP	Neighborhood
BP	GO:0072666	establishment of protein localization to vacuole	IEP	Neighborhood
BP	GO:0090351	seedling development	IEP	Neighborhood
BP	GO:0090662	ATP hydrolysis coupled transmembrane transport	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
BP	GO:0098754	detoxification	IEP	Neighborhood
CC	GO:0098803	respiratory chain complex	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
BP	GO:0099131	ATP hydrolysis coupled ion transmembrane transport	IEP	Neighborhood
BP	GO:0099132	ATP hydrolysis coupled cation transmembrane transport	IEP	Neighborhood
CC	GO:1902494	catalytic complex	IEP	Neighborhood
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Neighborhood
CC	GO:1990204	oxidoreductase complex	IEP	Neighborhood
CC	GO:1990234	transferase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005024	Snf7_fam	21	183

External Links

No external refs found!

AT2G19830 (SNF7.2, VPS32)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation