Gb_04858


Description : targeting peptid degrading peptidase (PreP)


Gene families : OG0002837 (Archaeplastida) Phylogenetic Tree(s): OG0002837_tree ,
OG_05_0004802 (LandPlants) Phylogenetic Tree(s): OG_05_0004802_tree ,
OG_06_0007405 (SeedPlants) Phylogenetic Tree(s): OG_06_0007405_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04858
Cluster HCCA: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00013900 evm_27.TU.AmTr_v1... Protein modification.peptide... 0.04 Archaeplastida
Cpa|evm.model.tig00001085.21 No alias Presequence protease 1, chloroplastic/mitochondrial... 0.01 Archaeplastida
Cre01.g020918 No alias Protein modification.peptide... 0.02 Archaeplastida
GSVIVT01031766001 No alias Protein modification.peptide... 0.05 Archaeplastida
MA_10436583g0010 No alias targeting peptid degrading peptidase (PreP) 0.02 Archaeplastida
MA_502125g0010 No alias targeting peptid degrading peptidase (PreP) 0.04 Archaeplastida
Mp4g12970.1 No alias targeting peptid degrading peptidase (PreP) 0.02 Archaeplastida
Pp3c5_3160V3.1 No alias presequence protease 1 0.03 Archaeplastida
Smo152047 No alias Protein modification.peptide... 0.02 Archaeplastida
Solyc01g108600.3.1 No alias targeting peptid degrading peptidase (PreP) 0.03 Archaeplastida
Zm00001e015926_P001 No alias targeting peptid degrading peptidase (PreP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007863 Peptidase_M16_C 4 157
IPR013578 Peptidase_M16C_assoc 235 484
No external refs found!