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  5. Gb_04990

Gb_04990


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 652.0)


Gene families : OG0012192 (Archaeplastida) Phylogenetic Tree(s): OG0012192_tree ,
OG_05_0014024 (LandPlants) Phylogenetic Tree(s): OG_05_0014024_tree ,
OG_06_0017965 (SeedPlants) Phylogenetic Tree(s): OG_06_0017965_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_04990
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Gb_14948 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.08 Archaeplastida
MA_10243939g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
Solyc04g080830.4.1 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.04 Archaeplastida
Zm00001e032595_P001 No alias Pentatricopeptide repeat-containing protein At4g01030,... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 445 474
IPR002885 Pentatricopeptide_repeat 654 677
IPR002885 Pentatricopeptide_repeat 83 101
IPR002885 Pentatricopeptide_repeat 173 199
IPR002885 Pentatricopeptide_repeat 272 319
IPR002885 Pentatricopeptide_repeat 578 626
IPR002885 Pentatricopeptide_repeat 373 418
IPR002885 Pentatricopeptide_repeat 477 525
IPR032867 DYW_dom 752 876
No external refs found!