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  5. AT2G20030

AT2G20030


Description : RING/U-box superfamily protein


Gene families : OG0003731 (Archaeplastida) Phylogenetic Tree(s): OG0003731_tree ,
OG_05_0002581 (LandPlants) Phylogenetic Tree(s): OG_05_0002581_tree ,
OG_06_0002001 (SeedPlants) Phylogenetic Tree(s): OG_06_0002001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G20030
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g51780.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_179334g0010 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
MA_35091g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc05g018310.1.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc12g007320.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e013130_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e032612_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0010043 response to zinc ion RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0002020 protease binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003996 acyl-CoA ligase activity IEP Neighborhood
MF GO:0004033 aldo-keto reductase (NADP) activity IEP Neighborhood
MF GO:0004034 aldose 1-epimerase activity IEP Neighborhood
MF GO:0004081 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity IEP Neighborhood
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004551 nucleotide diphosphatase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004801 sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005385 zinc ion transmembrane transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006722 triterpenoid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0006829 zinc ion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0008429 phosphatidylethanolamine binding IEP Neighborhood
MF GO:0008553 proton-exporting ATPase activity, phosphorylative mechanism IEP Neighborhood
MF GO:0008796 bis(5'-nucleosyl)-tetraphosphatase activity IEP Neighborhood
MF GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009051 pentose-phosphate shunt, oxidative branch IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010087 phloem or xylem histogenesis IEP Neighborhood
BP GO:0010106 cellular response to iron ion starvation IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
CC GO:0010168 ER body IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010263 tricyclic triterpenoid biosynthetic process IEP Neighborhood
BP GO:0010299 detoxification of cobalt ion IEP Neighborhood
BP GO:0010312 detoxification of zinc ion IEP Neighborhood
BP GO:0010345 suberin biosynthetic process IEP Neighborhood
BP GO:0010359 regulation of anion channel activity IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010393 galacturonan metabolic process IEP Neighborhood
BP GO:0010683 tricyclic triterpenoid metabolic process IEP Neighborhood
BP GO:0010959 regulation of metal ion transport IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
BP GO:0015959 diadenosine polyphosphate metabolic process IEP Neighborhood
BP GO:0015961 diadenosine polyphosphate catabolic process IEP Neighborhood
BP GO:0015965 diadenosine tetraphosphate metabolic process IEP Neighborhood
BP GO:0015967 diadenosine tetraphosphate catabolic process IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
BP GO:0016128 phytosteroid metabolic process IEP Neighborhood
BP GO:0016129 phytosteroid biosynthetic process IEP Neighborhood
BP GO:0016131 brassinosteroid metabolic process IEP Neighborhood
BP GO:0016132 brassinosteroid biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016794 diphosphoric monoester hydrolase activity IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0018685 alkane 1-monooxygenase activity IEP Neighborhood
BP GO:0019632 shikimate metabolic process IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0022898 regulation of transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
MF GO:0030410 nicotianamine synthase activity IEP Neighborhood
BP GO:0030417 nicotianamine metabolic process IEP Neighborhood
BP GO:0030418 nicotianamine biosynthetic process IEP Neighborhood
MF GO:0031559 oxidosqualene cyclase activity IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
BP GO:0032409 regulation of transporter activity IEP Neighborhood
BP GO:0032412 regulation of ion transmembrane transporter activity IEP Neighborhood
BP GO:0032870 cellular response to hormone stimulus IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033587 shikimate biosynthetic process IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034599 cellular response to oxidative stress IEP Neighborhood
BP GO:0034614 cellular response to reactive oxygen species IEP Neighborhood
BP GO:0034756 regulation of iron ion transport IEP Neighborhood
BP GO:0035690 cellular response to drug IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
BP GO:0042126 nitrate metabolic process IEP Neighborhood
BP GO:0042128 nitrate assimilation IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044070 regulation of anion transport IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0045431 flavonol synthase activity IEP Neighborhood
BP GO:0045488 pectin metabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
MF GO:0046715 active borate transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048364 root development IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048527 lateral root development IEP Neighborhood
BP GO:0048528 post-embryonic root development IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051347 positive regulation of transferase activity IEP Neighborhood
BP GO:0051552 flavone metabolic process IEP Neighborhood
BP GO:0051554 flavonol metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0051746 thalianol synthase activity IEP Neighborhood
BP GO:0051972 regulation of telomerase activity IEP Neighborhood
BP GO:0051973 positive regulation of telomerase activity IEP Neighborhood
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Neighborhood
BP GO:0052546 cell wall pectin metabolic process IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0061687 detoxification of inorganic compound IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0071241 cellular response to inorganic substance IEP Neighborhood
BP GO:0071248 cellular response to metal ion IEP Neighborhood
BP GO:0071281 cellular response to iron ion IEP Neighborhood
BP GO:0071310 cellular response to organic substance IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0071366 cellular response to indolebutyric acid stimulus IEP Neighborhood
BP GO:0071369 cellular response to ethylene stimulus IEP Neighborhood
BP GO:0071407 cellular response to organic cyclic compound IEP Neighborhood
BP GO:0071417 cellular response to organonitrogen compound IEP Neighborhood
BP GO:0071495 cellular response to endogenous stimulus IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071731 response to nitric oxide IEP Neighborhood
BP GO:0071732 cellular response to nitric oxide IEP Neighborhood
BP GO:0071941 nitrogen cycle metabolic process IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0072509 divalent inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0080003 thalianol metabolic process IEP Neighborhood
MF GO:0080004 thalian-diol desaturase activity IEP Neighborhood
MF GO:0080014 thalianol hydroxylase activity IEP Neighborhood
BP GO:0080026 response to indolebutyric acid IEP Neighborhood
BP GO:0080119 ER body organization IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0090696 post-embryonic plant organ development IEP Neighborhood
BP GO:0097366 response to bronchodilator IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
BP GO:0099402 plant organ development IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901699 cellular response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1901701 cellular response to oxygen-containing compound IEP Neighborhood
BP GO:1902170 cellular response to reactive nitrogen species IEP Neighborhood
BP GO:1903959 regulation of anion transmembrane transport IEP Neighborhood
BP GO:2000278 regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2000573 positive regulation of DNA biosynthetic process IEP Neighborhood
BP GO:2001057 reactive nitrogen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 123 166
No external refs found!