Gb_05116

Description : RNA editing factor (OTP82)

Gene families : OG0031068 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028972 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0027388 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_05116
Cluster	HCCA: Cluster_257

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0008408	3'-5' exonuclease activity	IEP	Neighborhood
MF	GO:0034061	DNA polymerase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	212	237
IPR032867	DYW_dom	712	836
IPR002885	Pentatricopeptide_repeat	136	184
IPR002885	Pentatricopeptide_repeat	539	586
IPR002885	Pentatricopeptide_repeat	438	485
IPR002885	Pentatricopeptide_repeat	238	285
IPR002885	Pentatricopeptide_repeat	338	385

External Links

No external refs found!

Gb_05116

Expression Profile

Co-expression Networks

Functional Annotation