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  5. Gb_05223

Gb_05223


Description : component F-box of SCF E3 ubiquitin ligase complex


Gene families : OG0003927 (Archaeplastida) Phylogenetic Tree(s): OG0003927_tree ,
OG_05_0003362 (LandPlants) Phylogenetic Tree(s): OG_05_0003362_tree ,
OG_06_0005287 (SeedPlants) Phylogenetic Tree(s): OG_06_0005287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05223
Cluster HCCA: Cluster_326

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g35110.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.04 Archaeplastida
Mp8g10660.1 No alias component F-box of SCF E3 ubiquitin ligase complex 0.02 Archaeplastida
Pp3c11_6360V3.1 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
Pp3c2_31590V3.1 No alias F-box/RNI-like superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 221 245
IPR001611 Leu-rich_rpt 142 166
IPR001810 F-box_dom 54 90
No external refs found!