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  5. Gb_05276

Gb_05276


Description : transcription factor (bHLH)


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0000297 (LandPlants) Phylogenetic Tree(s): OG_05_0000297_tree ,
OG_06_0005083 (SeedPlants) Phylogenetic Tree(s): OG_06_0005083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05276
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00111140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G65640 bHLH093 beta HLH protein 93 0.03 Archaeplastida
GSVIVT01004405001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01008305001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01013745001 No alias Transcription factor bHLH90 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os03g04310.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os10g39750.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c3_2760V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Solyc05g014590.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.06 Archaeplastida
Solyc07g018010.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc12g088130.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e013304_P003 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e025243_P003 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e030156_P003 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 56 98
No external refs found!