1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_05853

Gb_05853


Description : component LHCb1/2/3 of LHC-II complex


Gene families : OG0000035 (Archaeplastida) Phylogenetic Tree(s): OG0000035_tree ,
OG_05_0000162 (LandPlants) Phylogenetic Tree(s): OG_05_0000162_tree ,
OG_06_0000359 (SeedPlants) Phylogenetic Tree(s): OG_06_0000359_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05853
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00136650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 Archaeplastida
AMTR_s00175p00040360 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem I.LHC-I... 0.02 Archaeplastida
AT5G28450 No alias Chlorophyll A-B binding family protein 0.04 Archaeplastida
LOC_Os01g41710.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
MA_10431300g0020 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
MA_10431493g0010 No alias component LHCa1 of LHC-I complex 0.02 Archaeplastida
MA_18273g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_65346g0010 No alias Chlorophyll a-b binding protein P4, chloroplastic... 0.02 Archaeplastida
MA_815900g0010 No alias component LHCa3 of LHC-I complex 0.02 Archaeplastida
MA_97315g0010 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Mp7g05880.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Archaeplastida
Pp3c10_25360V3.1 No alias photosystem I light harvesting complex gene 2 0.02 Archaeplastida
Pp3c12_25430V3.1 No alias light harvesting complex photosystem II 0.02 Archaeplastida
Pp3c12_25460V3.1 No alias light harvesting complex photosystem II 0.03 Archaeplastida
Pp3c18_8100V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c20_23240V3.1 No alias photosystem I light harvesting complex gene 2 0.03 Archaeplastida
Pp3c21_3950V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c26_12230V3.1 No alias light harvesting complex of photosystem II 5 0.02 Archaeplastida
Pp3c2_36190V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36380V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Pp3c2_36500V3.1 No alias photosystem II light harvesting complex gene 2.1 0.02 Archaeplastida
Pp3c2_36570V3.1 No alias photosystem II light harvesting complex gene 2.1 0.03 Archaeplastida
Solyc01g105030.3.1 No alias component LHCb6 of LHC-II complex 0.05 Archaeplastida
Solyc01g105050.3.1 No alias component LHCb6 of LHC-II complex 0.05 Archaeplastida
Solyc02g070940.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g070950.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g070970.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Solyc02g070980.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Solyc02g070990.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Solyc02g071000.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Solyc02g071010.1.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Solyc02g071030.2.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Solyc03g005780.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.04 Archaeplastida
Solyc07g047850.3.1 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Solyc08g067330.1.1 No alias Chlorophyll a-b binding protein 16, chloroplastic... 0.04 Archaeplastida
Solyc12g009200.2.1 No alias component LHCa6 of LHC-I complex 0.02 Archaeplastida
Zm00001e004129_P001 No alias component LHCa4 of LHC-I complex 0.03 Archaeplastida
Zm00001e004940_P001 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Zm00001e004941_P001 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Zm00001e006561_P001 No alias component LHCb6 of LHC-II complex 0.03 Archaeplastida
Zm00001e010547_P001 No alias component LHCb4 of LHC-II complex 0.03 Archaeplastida
Zm00001e013742_P001 No alias component LHCa1 of LHC-I complex 0.02 Archaeplastida
Zm00001e020627_P001 No alias component LHCb1/2/3 of LHC-II complex 0.05 Archaeplastida
Zm00001e025141_P001 No alias component LHCa1 of LHC-I complex 0.04 Archaeplastida
Zm00001e026547_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e032450_P001 No alias Chlorophyll a-b binding protein, chloroplastic OS=Zea... 0.03 Archaeplastida
Zm00001e034922_P001 No alias Chlorophyll a-b binding protein 1, chloroplastic OS=Zea... 0.03 Archaeplastida
Zm00001e035249_P001 No alias component LHCb1/2/3 of LHC-II complex 0.03 Archaeplastida
Zm00001e041918_P001 No alias component LHCb6 of LHC-II complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 231
No external refs found!