Gb_05870


Description : Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana (sp|q9ast6|vsp55_arath : 134.0)


Gene families : OG0003578 (Archaeplastida) Phylogenetic Tree(s): OG0003578_tree ,
OG_05_0003023 (LandPlants) Phylogenetic Tree(s): OG_05_0003023_tree ,
OG_06_0003776 (SeedPlants) Phylogenetic Tree(s): OG_06_0003776_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05870
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g55980.1 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.05 Archaeplastida
Mp4g23290.1 No alias Vacuolar protein sorting-associated protein 55 homolog... 0.02 Archaeplastida
Pp3c16_810V3.1 No alias Vacuolar protein sorting 55 (VPS55) family protein 0.03 Archaeplastida
Pp3c6_13440V3.1 No alias Vacuolar protein sorting 55 (VPS55) family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007262 VPS55 5 115
No external refs found!