Gb_05888


Description : Protein SRG1 OS=Arabidopsis thaliana (sp|q39224|srg1_arath : 303.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 179.2)


Gene families : OG0000036 (Archaeplastida) Phylogenetic Tree(s): OG0000036_tree ,
OG_05_0000185 (LandPlants) Phylogenetic Tree(s): OG_05_0000185_tree ,
OG_06_0000094 (SeedPlants) Phylogenetic Tree(s): OG_06_0000094_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05888
Cluster HCCA: Cluster_496

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00193860 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.14... 0.02 Archaeplastida
AT3G11180 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
AT3G21420 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.05 Archaeplastida
AT3G47190 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
AT5G54000 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
GSVIVT01013257001 No alias S-norcoclaurine synthase 1 OS=Coptis japonica 0.03 Archaeplastida
GSVIVT01017737001 No alias Phytohormones.strigolactone.synthesis.LBO oxidoreductase 0.03 Archaeplastida
GSVIVT01018335001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01021326001 No alias Protein SRG1 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_05887 No alias S-norcoclaurine synthase 1 OS=Coptis japonica... 0.05 Archaeplastida
Gb_19770 No alias Protein SRG1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_169883g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c12_18540V3.1 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Archaeplastida
Zm00001e029477_P001 No alias Probable 2-oxoglutarate-dependent dioxygenase At3g111800... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 196 290
IPR026992 DIOX_N 60 167
No external refs found!