Gb_05964


Description : biotin synthase


Gene families : OG0004713 (Archaeplastida) Phylogenetic Tree(s): OG0004713_tree ,
OG_05_0007220 (LandPlants) Phylogenetic Tree(s): OG_05_0007220_tree ,
OG_06_0008498 (SeedPlants) Phylogenetic Tree(s): OG_06_0008498_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_05964
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT2G43360 BIOB, BIO2 Radical SAM superfamily protein 0.11 Archaeplastida
Cpa|evm.model.tig00021312.18 No alias Enzyme classification.EC_2 transferases.EC_2.8... 0.01 Archaeplastida
Cre06.g261150 No alias Coenzyme metabolism.biotin synthesis.biotin synthase 0.02 Archaeplastida
LOC_Os08g42730.1 No alias biotin synthase 0.04 Archaeplastida
Pp3c11_17440V3.1 No alias Radical SAM superfamily protein 0.01 Archaeplastida
Pp3c1_16250V3.1 No alias Radical SAM superfamily protein 0.03 Archaeplastida
Solyc06g073470.3.1 No alias biotin synthase 0.05 Archaeplastida
Zm00001e003724_P001 No alias biotin synthase 0.09 Archaeplastida
Zm00001e024243_P001 No alias biotin synthase 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0004312 fatty acid synthase activity IEP Neighborhood
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR010722 BATS_dom 272 362
IPR007197 rSAM 100 257
No external refs found!