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  5. Gb_06017

Gb_06017


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 113.0)


Gene families : OG0000054 (Archaeplastida) Phylogenetic Tree(s): OG0000054_tree ,
OG_05_0000126 (LandPlants) Phylogenetic Tree(s): OG_05_0000126_tree ,
OG_06_0000049 (SeedPlants) Phylogenetic Tree(s): OG_06_0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06017
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Gb_00282 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_00777 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_02012 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.06 Archaeplastida
Gb_02021 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Gb_04521 No alias Uncharacterized mitochondrial protein AtMg00820... 0.06 Archaeplastida
Gb_04681 No alias Uncharacterized mitochondrial protein AtMg00820... 0.08 Archaeplastida
Gb_05496 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_06309 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.07 Archaeplastida
Gb_08011 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Gb_17625 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_20738 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Gb_28245 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_30477 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 Archaeplastida
Gb_30484 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_31472 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_32087 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.03 Archaeplastida
Gb_33613 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_33741 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_36407 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 58 150
No external refs found!