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Gb_06023


Description : mRNA-binding regulatory factor (RBP45/47)


Gene families : OG0000444 (Archaeplastida) Phylogenetic Tree(s): OG0000444_tree ,
OG_05_0000471 (LandPlants) Phylogenetic Tree(s): OG_05_0000471_tree ,
OG_06_0000318 (SeedPlants) Phylogenetic Tree(s): OG_06_0000318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06023
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031780001 No alias Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia 0.02 Archaeplastida
LOC_Os07g33330.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 Archaeplastida
MA_10433182g0010 No alias Polyadenylate-binding protein RBP47C OS=Arabidopsis... 0.02 Archaeplastida
MA_10433660g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.04 Archaeplastida
Solyc03g031720.3.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 Archaeplastida
Solyc10g005260.3.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.04 Archaeplastida
Zm00001e021626_P001 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 129 193
IPR000504 RRM_dom 246 310
IPR000504 RRM_dom 36 104
No external refs found!