1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_06137

Gb_06137


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06137
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g39550.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_201937g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_201937g0020 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c14_26270V3.1 No alias myb-like HTH transcriptional regulator family protein 0.01 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Smo414222 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo441930 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc06g066340.4.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0043085 positive regulation of catalytic activity IEP Neighborhood
BP GO:0044093 positive regulation of molecular function IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 29 75
No external refs found!