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  5. Gb_06139

Gb_06139


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06139
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01024572001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
LOC_Os02g16809.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06060.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g25990.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g60720.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.02 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.03 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.03 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.02 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e019433_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e038997_P001 No alias alpha-class expansin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000123 positive regulation of stomatal complex development IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 176 253
IPR009009 RlpA-like_DPBB 80 163
No external refs found!