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  5. Gb_06266

Gb_06266


Description : transcription termination factor (TTF1). transcription factor (MYB-related)


Gene families : OG0004760 (Archaeplastida) Phylogenetic Tree(s): OG0004760_tree ,
OG_05_0004740 (LandPlants) Phylogenetic Tree(s): OG_05_0004740_tree ,
OG_06_0005271 (SeedPlants) Phylogenetic Tree(s): OG_06_0005271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06266
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT5G41020 No alias myb family transcription factor 0.03 Archaeplastida
LOC_Os06g19980.1 No alias transcription termination factor (TTF1). transcription... 0.02 Archaeplastida
Solyc03g019800.4.1 No alias transcription termination factor (TTF1). transcription... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005956 protein kinase CK2 complex IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!