Gb_06408

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000734 (SeedPlants) Phylogenetic Tree(s): OG_06_0000734_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_06408
Cluster	HCCA: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00133970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT5G64750	ABR1	Integrase-type DNA-binding superfamily protein	0.01	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01022277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033795001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Gb_01210	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01214	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01215	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01216	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01217	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_01221	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.01	Archaeplastida
Gb_17207	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17208	No alias	transcription factor (DREB). C2H2 zinc finger...	0.02	Archaeplastida
Gb_17211	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_17988	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_23870	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_24328	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_24329	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26856	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26857	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_26858	No alias	transcription factor (DREB)	0.01	Archaeplastida
Gb_34286	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_35474	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g43820.1	No alias	transcription factor (ERF)	0.01	Archaeplastida
MA_10433094g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_116185g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_5805979g0010	No alias	Ethylene-responsive transcription factor 1A...	0.05	Archaeplastida
MA_65985g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_922309g0010	No alias	transcription factor (ERF)	0.08	Archaeplastida
MA_928517g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9304g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	43	91

External Links

No external refs found!

Gb_06408

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation