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  5. Gb_06485

Gb_06485


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000340 (SeedPlants) Phylogenetic Tree(s): OG_06_0000340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06485
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT2G28710 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT2G37430 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT2G45120 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
AT3G49930 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.03 Archaeplastida
Gb_06484 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Gb_10419 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os01g62130.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g55540.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g08060.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os12g39400.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c22_2200V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Solyc01g090840.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g008440.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e001253_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e002063_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e003413_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011983_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e038074_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e038464_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002831 regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032101 regulation of response to external stimulus IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0043900 regulation of multi-organism process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!