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Gb_06538


Description : tRNA pseudouridine synthase (TruA)


Gene families : OG0004432 (Archaeplastida) Phylogenetic Tree(s): OG0004432_tree ,
OG_05_0004946 (LandPlants) Phylogenetic Tree(s): OG_05_0004946_tree ,
OG_06_0007540 (SeedPlants) Phylogenetic Tree(s): OG_06_0007540_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06538
Cluster HCCA: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
AT1G20370 No alias Pseudouridine synthase family protein 0.03 Archaeplastida
AT1G76120 No alias Pseudouridine synthase family protein 0.03 Archaeplastida
Pp3c5_14220V3.1 No alias Pseudouridine synthase family protein 0.02 Archaeplastida
Zm00001e015383_P004 No alias tRNA pseudouridine synthase (TruA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0009451 RNA modification IEA Interproscan
MF GO:0009982 pseudouridine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 461 564
No external refs found!