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  5. Gb_06597

Gb_06597


Description : Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana (sp|q0wpz6|pp158_arath : 511.0)


Gene families : OG0009700 (Archaeplastida) Phylogenetic Tree(s): OG0009700_tree ,
OG_05_0009739 (LandPlants) Phylogenetic Tree(s): OG_05_0009739_tree ,
OG_06_0007391 (SeedPlants) Phylogenetic Tree(s): OG_06_0007391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06597

Target Alias Description ECC score Gene Family Method Actions
MA_10243490g0010 No alias Pentatricopeptide repeat-containing protein At2g17140... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 428 477
IPR002885 Pentatricopeptide_repeat 288 337
IPR002885 Pentatricopeptide_repeat 182 227
IPR002885 Pentatricopeptide_repeat 558 606
IPR002885 Pentatricopeptide_repeat 358 407
IPR002885 Pentatricopeptide_repeat 661 690
IPR002885 Pentatricopeptide_repeat 521 551
IPR002885 Pentatricopeptide_repeat 624 657
IPR002885 Pentatricopeptide_repeat 247 278
No external refs found!