AT2G21400 (SRS3)

Aliases : SRS3

Description : SHI-related sequence3

Gene families : OG0001199 (Archaeplastida) Phylogenetic Tree(s): OG0001199_tree ,
OG_05_0000755 (LandPlants) Phylogenetic Tree(s): OG_05_0000755_tree ,
OG_06_0000578 (SeedPlants) Phylogenetic Tree(s): OG_06_0000578_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G21400
Cluster	HCCA: Cluster_234

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00223800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SRS...	0.03	Archaeplastida
GSVIVT01024206001	No alias	RNA biosynthesis.transcriptional activation.SRS...	0.04	Archaeplastida
GSVIVT01037267001	No alias	RNA biosynthesis.transcriptional activation.SRS...	0.05	Archaeplastida
LOC_Os01g72490.1	No alias	transcription factor (SRS)	0.05	Archaeplastida
LOC_Os05g32070.1	No alias	transcription factor (SRS)	0.03	Archaeplastida
LOC_Os06g49830.1	No alias	transcription factor (SRS)	0.02	Archaeplastida
LOC_Os09g36160.1	No alias	transcription factor (SRS)	0.02	Archaeplastida
Solyc10g054070.1.1	No alias	transcription factor (SRS)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048527	lateral root development	IEP	Neighborhood
BP	GO:0048528	post-embryonic root development	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
BP	GO:0090696	post-embryonic plant organ development	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!