Gb_06833


Description : subunit epsilon of peripheral CF1 subcomplex of ATP synthase complex


Gene families : OG0000722 (Archaeplastida) Phylogenetic Tree(s): OG0000722_tree ,
OG_05_0001384 (LandPlants) Phylogenetic Tree(s): OG_05_0001384_tree ,
OG_06_0000778 (SeedPlants) Phylogenetic Tree(s): OG_06_0000778_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06833
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272630 evm_27.TU.AmTr_v1... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.02 Archaeplastida
AMTR_s00606p00000120 evm_27.TU.AmTr_v1... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.07 Archaeplastida
ATCG00480 ATPB, PB ATP synthase subunit beta 0.12 Archaeplastida
Cre17.g698000 No alias Cellular respiration.oxidative phosphorylation.ATP... 0.06 Archaeplastida
GSVIVT01006210001 No alias ATP synthase subunit beta, chloroplastic OS=Vitis vinifera 0.12 Archaeplastida
Gb_37463 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.05 Archaeplastida
LOC_Os01g25065.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.19 Archaeplastida
LOC_Os03g55874.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.16 Archaeplastida
LOC_Os05g35320.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.1 Archaeplastida
LOC_Os06g39740.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.02 Archaeplastida
LOC_Os10g21266.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.19 Archaeplastida
LOC_Os12g10570.1 No alias ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.21 Archaeplastida
Smo236855 No alias ATP synthase subunit beta, chloroplastic OS=Psilotum nudum 0.05 Archaeplastida
Solyc00g500064.1.1 No alias subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.03 Archaeplastida
Zm00001e003901_P001 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e042030_P001 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e042068_P001 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e042081_P001 No alias no hits & (original description: none) 0.13 Archaeplastida
Zm00001e042082_P001 No alias ATP synthase subunit beta, chloroplastic OS=Zea mays... 0.13 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0015986 ATP synthesis coupled proton transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042773 ATP synthesis coupled electron transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 4 175
IPR020547 ATP_synth_F1_dsu/esu_C 251 294
IPR020546 ATP_synth_F1_dsu/esu_N 184 246
No external refs found!