Gb_06915


Description : component LSm1 of U6-associated LSm accessory ribonucleoprotein complex


Gene families : OG0003134 (Archaeplastida) Phylogenetic Tree(s): OG0003134_tree ,
OG_05_0064140 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0057673 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_06915
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00107350 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U6-associated LSm accessory... 0.02 Archaeplastida
Cre12.g538750 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.01 Archaeplastida
Mp4g20900.1 No alias component LSm1 of U6-associated LSm accessory... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!