AT2G21860

Description : violaxanthin de-epoxidase-related

Gene families : OG0008614 (Archaeplastida) Phylogenetic Tree(s): OG0008614_tree ,
OG_05_0009725 (LandPlants) Phylogenetic Tree(s): OG_05_0009725_tree ,
OG_06_0009334 (SeedPlants) Phylogenetic Tree(s): OG_06_0009334_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G21860

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Neighborhood
CC	GO:0009532	plastid stroma	IEP	Neighborhood
CC	GO:0009534	chloroplast thylakoid	IEP	Neighborhood
CC	GO:0009570	chloroplast stroma	IEP	Neighborhood
CC	GO:0009579	thylakoid	IEP	Neighborhood
BP	GO:0009767	photosynthetic electron transport chain	IEP	Neighborhood
BP	GO:0009791	post-embryonic development	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
BP	GO:0022900	electron transport chain	IEP	Neighborhood
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
CC	GO:0031976	plastid thylakoid	IEP	Neighborhood
CC	GO:0031984	organelle subcompartment	IEP	Neighborhood
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Neighborhood
MF	GO:0043495	protein membrane anchor	IEP	Neighborhood
CC	GO:0044434	chloroplast part	IEP	Neighborhood
CC	GO:0044435	plastid part	IEP	Neighborhood
BP	GO:0048518	positive regulation of biological process	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051193	regulation of cofactor metabolic process	IEP	Neighborhood
BP	GO:0051194	positive regulation of cofactor metabolic process	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0070453	regulation of heme biosynthetic process	IEP	Neighborhood
BP	GO:0070455	positive regulation of heme biosynthetic process	IEP	Neighborhood
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:1901403	positive regulation of tetrapyrrole metabolic process	IEP	Neighborhood
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	Neighborhood
BP	GO:1901465	positive regulation of tetrapyrrole biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR010788	VDE	238	489
IPR022571	Mg_chelatase_H_N	97	198

External Links

No external refs found!

AT2G21860

Expression Profile

Co-expression Networks

Functional Annotation