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  5. Gb_07326

Gb_07326


Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 134.0)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000372 (LandPlants) Phylogenetic Tree(s): OG_05_0000372_tree ,
OG_06_0000167 (SeedPlants) Phylogenetic Tree(s): OG_06_0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07326
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Gb_03156 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_03960 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_04018 No alias Uncharacterized mitochondrial protein AtMg00860... 0.17 Archaeplastida
Gb_04108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.14 Archaeplastida
Gb_07009 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.12 Archaeplastida
Gb_08366 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.14 Archaeplastida
Gb_09686 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_10189 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_12464 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_12930 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.17 Archaeplastida
Gb_14370 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_14609 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 Archaeplastida
Gb_15436 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.09 Archaeplastida
Gb_15572 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_16793 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.25 Archaeplastida
Gb_17670 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.14 Archaeplastida
Gb_18710 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_20325 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_21346 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.02 Archaeplastida
Gb_23692 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.17 Archaeplastida
Gb_26761 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_29150 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.1 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
Gb_33106 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_35176 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36546 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_40970 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 460 546
IPR001584 Integrase_cat-core 1402 1514
IPR000477 RT_dom 897 1056
No external refs found!