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  5. Gb_07336

Gb_07336


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 697.0)


Gene families : OG0009457 (Archaeplastida) Phylogenetic Tree(s): OG0009457_tree ,
OG_05_0058574 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051656 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07336
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT2G01740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
Gb_04611 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
MA_392867g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_6126791g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 467 493
IPR002885 Pentatricopeptide_repeat 270 298
IPR002885 Pentatricopeptide_repeat 495 524
IPR002885 Pentatricopeptide_repeat 239 267
IPR002885 Pentatricopeptide_repeat 301 330
IPR002885 Pentatricopeptide_repeat 730 754
IPR002885 Pentatricopeptide_repeat 332 361
IPR002885 Pentatricopeptide_repeat 202 234
IPR032867 DYW_dom 829 953
IPR002885 Pentatricopeptide_repeat 656 704
IPR002885 Pentatricopeptide_repeat 555 602
IPR002885 Pentatricopeptide_repeat 391 439
IPR002885 Pentatricopeptide_repeat 135 183
No external refs found!