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  5. Gb_07437

Gb_07437


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07437
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014362001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01032935001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
LOC_Os02g16839.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.05 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.02 Archaeplastida
Solyc06g051800.3.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc07g063210.3.1 No alias alpha-class expansin 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 63 147
IPR007117 Expansin_CBD 159 236
No external refs found!