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  5. Gb_07438

Gb_07438


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07438
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00060330 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AMTR_s00077p00063420 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.02 Archaeplastida
AT1G26770 ATEXPA10,... expansin A10 0.05 Archaeplastida
AT5G39270 EXPA22, ATEXP22,... expansin A22 0.02 Archaeplastida
GSVIVT01000214001 No alias Phytohormones.signalling peptides.NCRP... 0.03 Archaeplastida
GSVIVT01019965001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
LOC_Os01g14650.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os04g49410.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_19117g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_6644365g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.01 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c14_18030V3.1 No alias expansin A14 0.01 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.01 Archaeplastida
Pp3c24_15400V3.1 No alias expansin A15 0.02 Archaeplastida
Pp3c3_16280V3.1 No alias expansin A14 0.01 Archaeplastida
Pp3c7_12810V3.1 No alias expansin A14 0.01 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.04 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_15200V3.1 No alias expansin A1 0.03 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc01g010890.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc03g031840.3.1 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 117 194
IPR009009 RlpA-like_DPBB 21 105
No external refs found!