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  5. Gb_07702

Gb_07702


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07702
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cre01.g000700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g43120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g29310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_1252g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43248g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_479316g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_569551g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_77628g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp8g15250.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g074790.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 140 183
No external refs found!