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  5. Gb_07725

Gb_07725


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 632.0)


Gene families : OG0010914 (Archaeplastida) Phylogenetic Tree(s): OG0010914_tree ,
OG_05_0008543 (LandPlants) Phylogenetic Tree(s): OG_05_0008543_tree ,
OG_06_0002335 (SeedPlants) Phylogenetic Tree(s): OG_06_0002335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07725
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
Gb_23075 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
Gb_28758 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_481619g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
MA_491886g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 251 299
IPR002885 Pentatricopeptide_repeat 578 625
IPR002885 Pentatricopeptide_repeat 678 727
IPR002885 Pentatricopeptide_repeat 151 198
IPR002885 Pentatricopeptide_repeat 383 432
IPR032867 DYW_dom 852 976
IPR002885 Pentatricopeptide_repeat 518 547
IPR002885 Pentatricopeptide_repeat 487 517
IPR002885 Pentatricopeptide_repeat 459 485
IPR002885 Pentatricopeptide_repeat 753 778
No external refs found!