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  5. Gb_07749

Gb_07749


Description : GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana (sp|q9fxb6|lip4_arath : 353.0)


Gene families : OG0000359 (Archaeplastida) Phylogenetic Tree(s): OG0000359_tree ,
OG_05_0000183 (LandPlants) Phylogenetic Tree(s): OG_05_0000183_tree ,
OG_06_0001231 (SeedPlants) Phylogenetic Tree(s): OG_06_0001231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07749
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00205650 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00049p00229270 evm_27.TU.AmTr_v1... GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G54790 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT3G62280 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.06 Archaeplastida
GSVIVT01000005001 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01000546001 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000547001 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031290001 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01032373001 No alias GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os01g22640.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g22780.1 No alias GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g04240.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os07g39750.1 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10426064g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10426084g0030 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_13521g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_42044g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_5042g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_75971g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9754208g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9910392g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g22200.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g00640.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp7g02160.1 No alias Alpha-L-fucosidase 3 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Mp7g02180.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g07250.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c1_17860V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
Smo411673 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.04 Archaeplastida
Smo90062 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc01g098650.2.1 No alias GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc01g100930.3.1 No alias GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc05g013680.3.1 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 48 376
No external refs found!