Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 499.0)
Gene families : OG0003060 (Archaeplastida) Phylogenetic Tree(s): OG0003060_tree ,
OG_05_0058440 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051514 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_07754 | |
Cluster | HCCA: Cluster_300 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_408185g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | Archaeplastida | |
MA_956160g0010 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 331 | 378 |
IPR002885 | Pentatricopeptide_repeat | 431 | 480 |
IPR002885 | Pentatricopeptide_repeat | 74 | 123 |
IPR002885 | Pentatricopeptide_repeat | 151 | 176 |
IPR002885 | Pentatricopeptide_repeat | 271 | 300 |
IPR002885 | Pentatricopeptide_repeat | 506 | 531 |
IPR002885 | Pentatricopeptide_repeat | 240 | 270 |
IPR002885 | Pentatricopeptide_repeat | 209 | 239 |
IPR002885 | Pentatricopeptide_repeat | 178 | 207 |
No external refs found! |