Gb_07754


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 499.0)


Gene families : OG0003060 (Archaeplastida) Phylogenetic Tree(s): OG0003060_tree ,
OG_05_0058440 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051514 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07754
Cluster HCCA: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.02 Archaeplastida
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 331 378
IPR002885 Pentatricopeptide_repeat 431 480
IPR002885 Pentatricopeptide_repeat 74 123
IPR002885 Pentatricopeptide_repeat 151 176
IPR002885 Pentatricopeptide_repeat 271 300
IPR002885 Pentatricopeptide_repeat 506 531
IPR002885 Pentatricopeptide_repeat 240 270
IPR002885 Pentatricopeptide_repeat 209 239
IPR002885 Pentatricopeptide_repeat 178 207
No external refs found!