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  5. Gb_07756

Gb_07756


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 640.0)


Gene families : OG0011413 (Archaeplastida) Phylogenetic Tree(s): OG0011413_tree ,
OG_05_0058439 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051513 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07756
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Gb_04381 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.1 Archaeplastida
Gb_07755 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 Archaeplastida
Gb_36142 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.11 Archaeplastida
MA_297123g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 656 780
IPR002885 Pentatricopeptide_repeat 557 583
IPR002885 Pentatricopeptide_repeat 149 195
IPR002885 Pentatricopeptide_repeat 483 531
IPR002885 Pentatricopeptide_repeat 382 429
IPR002885 Pentatricopeptide_repeat 249 297
IPR002885 Pentatricopeptide_repeat 348 379
No external refs found!