1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_07993

Gb_07993


Description : WTF1 plastidial RNA basal splicing factor


Gene families : OG0001104 (Archaeplastida) Phylogenetic Tree(s): OG0001104_tree ,
OG_05_0001147 (LandPlants) Phylogenetic Tree(s): OG_05_0001147_tree ,
OG_06_0002903 (SeedPlants) Phylogenetic Tree(s): OG_06_0002903_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_07993
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00241290 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
AT4G01037 WTF1, AtWTF1 Ubiquitin carboxyl-terminal hydrolase family protein 0.04 Archaeplastida
LOC_Os04g24710.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.06 Archaeplastida
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
Pp3c18_21300V3.1 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 Archaeplastida
Smo409264 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.04 Archaeplastida
Smo422954 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 Archaeplastida
Smo98802 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR021099 PORR_domain 93 422
No external refs found!