AT2G22740 (SDG23, SUVH6)

Aliases : SDG23, SUVH6

Description : SU(VAR)3-9 homolog 6

Gene families : OG0000257 (Archaeplastida) Phylogenetic Tree(s): OG0000257_tree ,
OG_05_0001628 (LandPlants) Phylogenetic Tree(s): OG_05_0001628_tree ,
OG_06_0001153 (SeedPlants) Phylogenetic Tree(s): OG_06_0001153_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22740
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00076340	evm_27.TU.AmTr_v1...	Enzyme classification.EC_2 transferases.EC_2.1...	0.03	Archaeplastida
Mp6g20230.1	No alias	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.03	Archaeplastida
Pp3c12_13280V3.1	No alias	SU(VAR)3-9 homolog 4	0.03	Archaeplastida
Solyc03g093760.1.1	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
Solyc06g060960.3.1	No alias	class V/Su(var) histone methyltransferase component of...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IDA	Interproscan
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008327	methyl-CpG binding	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010428	methyl-CpNpG binding	IDA	Interproscan
MF	GO:0010429	methyl-CpNpN binding	IDA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	IDA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	Neighborhood
BP	GO:0006301	postreplication repair	IEP	Neighborhood
BP	GO:0006415	translational termination	IEP	Neighborhood
MF	GO:0008079	translation termination factor activity	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
BP	GO:0022411	cellular component disassembly	IEP	Neighborhood
BP	GO:0032984	protein-containing complex disassembly	IEP	Neighborhood
BP	GO:0043624	cellular protein complex disassembly	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001214	SET_dom	627	760
IPR003105	SRA_YDG	329	486
IPR007728	Pre-SET_dom	510	608

External Links

No external refs found!

AT2G22740 (SDG23, SUVH6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation