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  5. Gb_08014

Gb_08014


Description : DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana (sp|q9ffq1|rh31_arath : 268.0)


Gene families : OG0001868 (Archaeplastida) Phylogenetic Tree(s): OG0001868_tree ,
OG_05_0002062 (LandPlants) Phylogenetic Tree(s): OG_05_0002062_tree ,
OG_06_0001848 (SeedPlants) Phylogenetic Tree(s): OG_06_0001848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08014

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00261910 evm_27.TU.AmTr_v1... Probable DEAD-box ATP-dependent RNA helicase 48... 0.01 Archaeplastida
AT1G63250 No alias DEA(D/H)-box RNA helicase family protein 0.01 Archaeplastida
Cpa|evm.model.tig00020713.11 No alias Probable DEAD-box ATP-dependent RNA helicase 48... 0.02 Archaeplastida
LOC_Os06g33520.1 No alias DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa... 0.01 Archaeplastida
Mp7g07740.1 No alias Probable DEAD-box ATP-dependent RNA helicase 48... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 59 132
IPR001650 Helicase_C 183 263
No external refs found!