Gb_08253

Description : RNA editing factor (OTP82)

Gene families : OG0022802 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0021745 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0021101 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08253
Cluster	HCCA: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_37070	No alias	Pentatricopeptide repeat-containing protein At4g33170...	0.1	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	361	386
IPR002885	Pentatricopeptide_repeat	285	333
IPR002885	Pentatricopeptide_repeat	184	232
IPR002885	Pentatricopeptide_repeat	387	434
IPR032867	DYW_dom	560	684
IPR002885	Pentatricopeptide_repeat	454	485
IPR002885	Pentatricopeptide_repeat	153	182

External Links

No external refs found!

Gb_08253

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation