Gb_08288

Description : subunit alpha of methylcrotonoyl-CoA carboxylase complex

Gene families : OG0001090 (Archaeplastida) Phylogenetic Tree(s): OG0001090_tree ,
OG_05_0001880 (LandPlants) Phylogenetic Tree(s): OG_05_0001880_tree ,
OG_06_0002799 (SeedPlants) Phylogenetic Tree(s): OG_06_0002799_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08288
Cluster	HCCA: Cluster_311

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g278098	No alias	Amino acid metabolism.degradation.branched-chain amino...	0.02	Archaeplastida
Cre08.g359350	No alias	Lipid metabolism.fatty acid synthesis.acetyl-CoA...	0.02	Archaeplastida
Pp3c18_10570V3.1	No alias	methylcrotonyl-CoA carboxylase alpha chain,...	0.03	Archaeplastida
Pp3c8_7840V3.1	No alias	acetyl Co-enzyme a carboxylase biotin carboxylase subunit	0.03	Archaeplastida
Solyc09g065540.3.1	No alias	subunit alpha of methylcrotonoyl-CoA carboxylase complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004329	formate-tetrahydrofolate ligase activity	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016874	ligase activity	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005481	BC-like_N	34	142
IPR005479	CbamoylP_synth_lsu-like_ATP-bd	147	355
IPR000089	Biotin_lipoyl	666	730
IPR005482	Biotin_COase_C	369	476

External Links

No external refs found!