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  5. Gb_08297

Gb_08297


Description : ATG8 autophagosome ubiquitin-fold protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0001268 (LandPlants) Phylogenetic Tree(s): OG_05_0001268_tree ,
OG_06_0001955 (SeedPlants) Phylogenetic Tree(s): OG_06_0001955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08297
Cluster HCCA: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00185030 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 Archaeplastida
AT2G45170 ATG8E, ATATG8E AUTOPHAGY 8E 0.03 Archaeplastida
Cre16.g689650 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.01 Archaeplastida
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida
MA_10426292g0030 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 Archaeplastida
MA_6581216g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.05 Archaeplastida
Pp3c1_32170V3.1 No alias Ubiquitin-like superfamily protein 0.04 Archaeplastida
Solyc01g068060.4.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Solyc08g078820.3.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.05 Archaeplastida
Solyc10g006270.4.1 No alias No annotation 0.04 Archaeplastida
Zm00001e006887_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Zm00001e039966_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!