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  5. AT1G09220

AT1G09220


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG0014095 (Archaeplastida) Phylogenetic Tree(s): OG0014095_tree ,
OG_05_0001276 (LandPlants) Phylogenetic Tree(s): OG_05_0001276_tree ,
OG_06_0000902 (SeedPlants) Phylogenetic Tree(s): OG_06_0000902_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G09220
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01012620001 No alias Pentatricopeptide repeat-containing protein At1g09220,... 0.07 Archaeplastida
GSVIVT01015793001 No alias No description available 0.5 Archaeplastida
Solyc06g009620.1.1 No alias Pentatricopeptide repeat-containing protein At1g09220,... 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0022626 cytosolic ribosome IDA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 221 248
IPR002885 Pentatricopeptide_repeat 190 217
IPR002885 Pentatricopeptide_repeat 296 318
IPR002885 Pentatricopeptide_repeat 162 188
IPR002885 Pentatricopeptide_repeat 323 371
No external refs found!