AT2G23080

Description : Protein kinase superfamily protein

Gene families : OG0001198 (Archaeplastida) Phylogenetic Tree(s): OG0001198_tree ,
OG_05_0001151 (LandPlants) Phylogenetic Tree(s): OG_05_0001151_tree ,
OG_06_0001142 (SeedPlants) Phylogenetic Tree(s): OG_06_0001142_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G23080
Cluster	HCCA: Cluster_38

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01009366001	No alias	Protein modification.phosphorylation.CMGC kinase...	0.03	Archaeplastida
LOC_Os03g10940.1	No alias	catalytic subunit alpha of CK-II protein kinase	0.03	Archaeplastida
Mp8g05810.1	No alias	catalytic subunit alpha of CK-II protein kinase	0.03	Archaeplastida
Zm00001e011989_P001	No alias	catalytic subunit alpha of CK-II protein kinase	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IDA	Interproscan
BP	GO:0006325	chromatin organization	IDA	Interproscan
BP	GO:0006325	chromatin organization	IEP	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IGI	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009612	response to mechanical stimulus	RCA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010212	response to ionizing radiation	None	Extended
BP	GO:0010225	response to UV-C	IMP	Interproscan
BP	GO:0010332	response to gamma radiation	IMP	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0019722	calcium-mediated signaling	RCA	Interproscan
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	IEP	Interproscan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:2001020	regulation of response to DNA damage stimulus	IEP	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	Neighborhood
MF	GO:0004516	nicotinate phosphoribosyltransferase activity	IEP	Neighborhood
MF	GO:0004930	G-protein coupled receptor activity	IEP	Neighborhood
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005093	Rab GDP-dissociation inhibitor activity	IEP	Neighborhood
MF	GO:0005096	GTPase activator activity	IEP	Neighborhood
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005674	transcription factor TFIIF complex	IEP	Neighborhood
CC	GO:0005956	protein kinase CK2 complex	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006808	regulation of nitrogen utilization	IEP	Neighborhood
BP	GO:0007049	cell cycle	IEP	Neighborhood
MF	GO:0008134	transcription factor binding	IEP	Neighborhood
BP	GO:0008156	negative regulation of DNA replication	IEP	Neighborhood
BP	GO:0008219	cell death	IEP	Neighborhood
MF	GO:0008901	ferredoxin hydrogenase activity	IEP	Neighborhood
BP	GO:0009432	SOS response	IEP	Neighborhood
MF	GO:0009672	auxin:proton symporter activity	IEP	Neighborhood
CC	GO:0010008	endosome membrane	IEP	Neighborhood
BP	GO:0010082	regulation of root meristem growth	IEP	Neighborhood
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	Neighborhood
BP	GO:0010948	negative regulation of cell cycle process	IEP	Neighborhood
MF	GO:0015293	symporter activity	IEP	Neighborhood
MF	GO:0015294	solute:cation symporter activity	IEP	Neighborhood
MF	GO:0015295	solute:proton symporter activity	IEP	Neighborhood
BP	GO:0015858	nucleoside transport	IEP	Neighborhood
BP	GO:0015864	pyrimidine nucleoside transport	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
MF	GO:0016695	oxidoreductase activity, acting on hydrogen as donor	IEP	Neighborhood
MF	GO:0016699	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor	IEP	Neighborhood
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Neighborhood
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Neighborhood
BP	GO:0016925	protein sumoylation	IEP	Neighborhood
MF	GO:0017137	Rab GTPase binding	IEP	Neighborhood
BP	GO:0019357	nicotinate nucleotide biosynthetic process	IEP	Neighborhood
BP	GO:0019358	nicotinate nucleotide salvage	IEP	Neighborhood
BP	GO:0019365	pyridine nucleotide salvage	IEP	Neighborhood
MF	GO:0019789	SUMO transferase activity	IEP	Neighborhood
CC	GO:0030117	membrane coat	IEP	Neighborhood
CC	GO:0030118	clathrin coat	IEP	Neighborhood
CC	GO:0030120	vesicle coat	IEP	Neighborhood
CC	GO:0030125	clathrin vesicle coat	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030695	GTPase regulator activity	IEP	Neighborhood
MF	GO:0031072	heat shock protein binding	IEP	Neighborhood
CC	GO:0031306	intrinsic component of mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0031307	integral component of mitochondrial outer membrane	IEP	Neighborhood
BP	GO:0031401	positive regulation of protein modification process	IEP	Neighborhood
BP	GO:0031647	regulation of protein stability	IEP	Neighborhood
CC	GO:0032592	integral component of mitochondrial membrane	IEP	Neighborhood
BP	GO:0032876	negative regulation of DNA endoreduplication	IEP	Neighborhood
BP	GO:0042127	regulation of cell proliferation	IEP	Neighborhood
BP	GO:0043087	regulation of GTPase activity	IEP	Neighborhood
BP	GO:0043173	nucleotide salvage	IEP	Neighborhood
BP	GO:0043547	positive regulation of GTPase activity	IEP	Neighborhood
CC	GO:0044433	cytoplasmic vesicle part	IEP	Neighborhood
BP	GO:0045489	pectin biosynthetic process	IEP	Neighborhood
BP	GO:0045931	positive regulation of mitotic cell cycle	IEP	Neighborhood
BP	GO:0046497	nicotinate nucleotide metabolic process	IEP	Neighborhood
MF	GO:0050566	asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity	IEP	Neighborhood
BP	GO:0050821	protein stabilization	IEP	Neighborhood
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051345	positive regulation of hydrolase activity	IEP	Neighborhood
MF	GO:0051879	Hsp90 protein binding	IEP	Neighborhood
BP	GO:0060145	viral gene silencing in virus induced gene silencing	IEP	Neighborhood
BP	GO:0060250	germ-line stem-cell niche homeostasis	IEP	Neighborhood
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Neighborhood
BP	GO:0070919	production of siRNA involved in chromatin silencing by small RNA	IEP	Neighborhood
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	Neighborhood
BP	GO:0080038	positive regulation of cytokinin-activated signaling pathway	IEP	Neighborhood
CC	GO:0098573	intrinsic component of mitochondrial membrane	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
BP	GO:2000104	negative regulation of DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:2000539	regulation of protein geranylgeranylation	IEP	Neighborhood
BP	GO:2000541	positive regulation of protein geranylgeranylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	34	319

External Links

No external refs found!

AT2G23080

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation