Gb_08421


Description : beta amylase


Gene families : OG0000278 (Archaeplastida) Phylogenetic Tree(s): OG0000278_tree ,
OG_05_0000691 (LandPlants) Phylogenetic Tree(s): OG_05_0000691_tree ,
OG_06_0000632 (SeedPlants) Phylogenetic Tree(s): OG_06_0000632_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08421
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00205080 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT3G23920 BAM1, BMY7, TR-BAMY beta-amylase 1 0.03 Archaeplastida
Cre06.g270350 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Gb_26014 No alias beta amylase 0.05 Archaeplastida
LOC_Os07g35880.1 No alias beta amylase 0.03 Archaeplastida
LOC_Os07g47120.1 No alias beta amylase 0.02 Archaeplastida
LOC_Os10g32810.1 No alias beta amylase 0.02 Archaeplastida
Pp3c16_11260V3.1 No alias beta-amylase 1 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 156 581
No external refs found!