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  5. AT1G09230

AT1G09230


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0003597 (Archaeplastida) Phylogenetic Tree(s): OG0003597_tree ,
OG_05_0005822 (LandPlants) Phylogenetic Tree(s): OG_05_0005822_tree ,
OG_06_0006437 (SeedPlants) Phylogenetic Tree(s): OG_06_0006437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G09230
Cluster HCCA: Cluster_162


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0002218 activation of innate immune response IEP Neighborhood
BP GO:0002253 activation of immune response IEP Neighborhood
BP GO:0002684 positive regulation of immune system process IEP Neighborhood
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005829 cytosol IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006879 cellular iron ion homeostasis IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
BP GO:0009626 plant-type hypersensitive response IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009870 defense response signaling pathway, resistance gene-dependent IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
BP GO:0010101 post-embryonic root morphogenesis IEP Neighborhood
BP GO:0010102 lateral root morphogenesis IEP Neighborhood
CC GO:0012505 endomembrane system IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019781 NEDD8 activating enzyme activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0031349 positive regulation of defense response IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
CC GO:0031354 intrinsic component of plastid outer membrane IEP Neighborhood
CC GO:0031355 integral component of plastid outer membrane IEP Neighborhood
CC GO:0031358 intrinsic component of chloroplast outer membrane IEP Neighborhood
CC GO:0031359 integral component of chloroplast outer membrane IEP Neighborhood
BP GO:0032957 inositol trisphosphate metabolic process IEP Neighborhood
BP GO:0034050 host programmed cell death induced by symbiont IEP Neighborhood
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Neighborhood
MF GO:0034595 phosphatidylinositol phosphate 5-phosphatase activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0040034 regulation of development, heterochronic IEP Neighborhood
CC GO:0042644 chloroplast nucleoid IEP Neighborhood
CC GO:0042646 plastid nucleoid IEP Neighborhood
BP GO:0045089 positive regulation of innate immune response IEP Neighborhood
BP GO:0045116 protein neddylation IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
BP GO:0050778 positive regulation of immune response IEP Neighborhood
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Neighborhood
BP GO:0055072 iron ion homeostasis IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0106019 phosphatidylinositol-4,5-bisphosphate phosphatase activity IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 30 95
IPR000504 RRM_dom 354 426
No external refs found!