Gb_08537

Description : component RPS15a of SSU proteome

Gene families : OG0001596 (Archaeplastida) Phylogenetic Tree(s): OG0001596_tree ,
OG_05_0001709 (LandPlants) Phylogenetic Tree(s): OG_05_0001709_tree ,
OG_06_0002630 (SeedPlants) Phylogenetic Tree(s): OG_06_0002630_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_08537
Cluster	HCCA: Cluster_323

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00192110	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.06	Archaeplastida
AT1G07770	RPS15A	ribosomal protein S15A	0.14	Archaeplastida
AT3G46040	RPS15AD	ribosomal protein S15A D	0.07	Archaeplastida
AT5G59850	No alias	Ribosomal protein S8 family protein	0.13	Archaeplastida
Cpa\|evm.model.tig00000158.110	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.16	Archaeplastida
Cre05.g234637	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.17	Archaeplastida
GSVIVT01016595001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.11	Archaeplastida
GSVIVT01025622001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.08	Archaeplastida
LOC_Os02g27760.1	No alias	component RPS15a of SSU proteome	0.17	Archaeplastida
LOC_Os07g10720.1	No alias	component RPS15a of SSU proteome	0.19	Archaeplastida
MA_10427318g0020	No alias	component RPS15a of SSU proteome	0.16	Archaeplastida
MA_57835g0010	No alias	component RPS15a of SSU proteome	0.15	Archaeplastida
MA_82191g0010	No alias	component RPS15a of SSU proteome	0.11	Archaeplastida
Mp8g06510.1	No alias	component RPS15a of SSU proteome	0.16	Archaeplastida
Mp8g13010.1	No alias	component RPS15a of SSU proteome	0.17	Archaeplastida
Pp3c11_10490V3.1	No alias	Ribosomal protein S8 family protein	0.1	Archaeplastida
Pp3c1_4290V3.1	No alias	Ribosomal protein S8 family protein	0.15	Archaeplastida
Pp3c2_32050V3.1	No alias	Ribosomal protein S8 family protein	0.15	Archaeplastida
Pp3c3_1140V3.1	No alias	ribosomal protein S15A	0.12	Archaeplastida
Pp3c4_27540V3.1	No alias	Ribosomal protein S8 family protein	0.15	Archaeplastida
Pp3c5_5750V3.1	No alias	ribosomal protein S15A	0.1	Archaeplastida
Smo228163	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.08	Archaeplastida
Solyc04g150158.1.1	No alias	component RPS15a of SSU proteome	0.14	Archaeplastida
Zm00001e016394_P001	No alias	component RPS15a of SSU proteome	0.18	Archaeplastida
Zm00001e024375_P001	No alias	no hits & (original description: none)	0.11	Archaeplastida
Zm00001e026115_P001	No alias	component RPS15a of SSU proteome	0.18	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
CC	GO:0000444	MIS12/MIND type complex	IEP	Neighborhood
CC	GO:0000818	nuclear MIS12/MIND complex	IEP	Neighborhood
MF	GO:0003682	chromatin binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005048	signal sequence binding	IEP	Neighborhood
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	Neighborhood
CC	GO:0005839	proteasome core complex	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006605	protein targeting	IEP	Neighborhood
BP	GO:0006612	protein targeting to membrane	IEP	Neighborhood
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Neighborhood
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Neighborhood
MF	GO:0008097	5S rRNA binding	IEP	Neighborhood
MF	GO:0008312	7S RNA binding	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
MF	GO:0030942	endoplasmic reticulum signal peptide binding	IEP	Neighborhood
MF	GO:0033218	amide binding	IEP	Neighborhood
BP	GO:0033365	protein localization to organelle	IEP	Neighborhood
BP	GO:0034613	cellular protein localization	IEP	Neighborhood
MF	GO:0042277	peptide binding	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
CC	GO:0044454	nuclear chromosome part	IEP	Neighborhood
BP	GO:0045047	protein targeting to ER	IEP	Neighborhood
CC	GO:0048500	signal recognition particle	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood
MF	GO:0070003	threonine-type peptidase activity	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072594	establishment of protein localization to organelle	IEP	Neighborhood
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Neighborhood
BP	GO:0072657	protein localization to membrane	IEP	Neighborhood
BP	GO:0090150	establishment of protein localization to membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	7	130

External Links

No external refs found!

Gb_08537

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation