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  5. Gb_08618

Gb_08618


Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 650.0)


Gene families : OG0014642 (Archaeplastida) Phylogenetic Tree(s): OG0014642_tree ,
OG_05_0012829 (LandPlants) Phylogenetic Tree(s): OG_05_0012829_tree ,
OG_06_0011984 (SeedPlants) Phylogenetic Tree(s): OG_06_0011984_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_08618
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Gb_09416 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
Smo108325 No alias Pentatricopeptide repeat-containing protein At2g29760,... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 407 455
IPR002885 Pentatricopeptide_repeat 509 556
IPR002885 Pentatricopeptide_repeat 206 253
IPR002885 Pentatricopeptide_repeat 104 152
IPR032867 DYW_dom 682 795
IPR002885 Pentatricopeptide_repeat 483 508
IPR002885 Pentatricopeptide_repeat 281 307
IPR002885 Pentatricopeptide_repeat 584 607
IPR002885 Pentatricopeptide_repeat 309 336
No external refs found!